The detailed information of tRNA gene sequence


Sequence ID>W1910574365
Genome IDJPWC01000015
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira profundimaris R4-5 [JPWC]
Start position on genome 20714
End posion on genome 20638
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttgtcttgg
tRNA gene sequence 
GGGCCCGTAGCTCAATTGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGGGGGTTCAAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
tctttaaaaa
Secondary structure (Cloverleaf model)
>W1910574365	Met	CAT
                   g      ACCA tctttaaaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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