The detailed information of tRNA gene sequence


Sequence ID>W1910636849
Genome IDLPWH01000003
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta sphaeroplastigenens JC133 [LPWH]
Start position on genome 83625
End posion on genome 83714
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggttaatcT
tRNA gene sequence 
GGAGGGGTGCGAGAGTGGTTGAATCGGGCTCCCTGCTAAGGAGTTGTGCTCTATCCGGGT
ACCGAGGGTTCGAATCCCTCCCCCTCCGTtg
Downstream region at tRNA end position 
tttgatagtt
Secondary structure (Cloverleaf model)
>W1910636849	Ser	GCT
                   T      GTtg tttgatagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTGCTCTATCCGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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