The detailed information of tRNA gene sequence


Sequence ID>W1910658194
Genome IDMBFK01000065
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSinorhizobium shofinae CCBAU 251167 [MBFK]
Start position on genome 47720
End posion on genome 47624
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tgctgcatcA
tRNA gene sequence 
GGAGGAGATTCGTCCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGAGAGACG
GTCCTTGGTGGGTTCGACCCCCACTCTCTTCCGCC
Downstream region at tRNA end position 
Atcgccgaat
Secondary structure (Cloverleaf model)
>W1910658194	Sec	TCA
                   A      CGCC Atcgccgaat
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     A   C
                     G + T          C C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       T G C T       G T G G G     C
    G       +     +                 T T
    G       G G C G
      T G G        T     GAGGGGCCGAGAGACGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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