The detailed information of tRNA gene sequence


Sequence ID>W1910719662
Genome IDMGCC01000126
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19 [MGCC]
Start position on genome 39709
End posion on genome 39612
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
cagagttaca
tRNA gene sequence 
GGAAGCGTCTAGGATCCCGGTGGGCCTCCCGGACTTCAAATCCGGCGTCCGGCTCTAGAC
AAGCTGGAGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
gataggtccg
Secondary structure (Cloverleaf model)
>W1910719662	Sec	TCA
                   a      GCCA gataggtccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    C     C A C C C     A
      C C T        T      | | | | |     G
    C       A G G A       G T G G G     C
    G         | | |                 T T
    G       G C C T
      T G G        C     CGTCCGGCTCTAGACAAGCTGGAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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