The detailed information of tRNA gene sequence


Sequence ID>W1910719847
Genome IDMGCJ01000148
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_73_47 [MGCJ]
Start position on genome 5938
End posion on genome 5861
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
cgttgtcagg
tRNA gene sequence 
GCCCCTGTAGCTCAGCCTGGAAAGAGCTGGCGGCTACTAACCGCTGAGTCCCGGGTTCGA
ATCCCGGCAGGGGCACCA
Downstream region at tRNA end position 
ccccctacaa
Secondary structure (Cloverleaf model)
>W1910719847	Ser	ACT
                   g      ACCA ccccctacaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    A A A          T     GAGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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