The detailed information of tRNA gene sequence


Sequence ID>W1910729698
Genome IDMGYW01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesGammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_18 [MGYW]
Start position on genome 5631
End posion on genome 5557
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttttcacgc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCTAGGTTCAAG
TCCTAGTGGGCCCACtt
Downstream region at tRNA end position 
tattagcggg
Secondary structure (Cloverleaf model)
>W1910729698	Met	CAT
                   c      ACtt tattagcggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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