The detailed information of tRNA gene sequence


Sequence ID>W1910796886
Genome IDMSDW01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanohalarchaeum thermophilum HMET1 [MSDW]
Start position on genome 265375
End posion on genome 265290
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aataaaagag
tRNA gene sequence 
GCGGGGGTTGCCGAGCTAGGCCAAAGGCGGGAGACTCAAGATCTCCTCCCGTAGGGGTCC
AGGGGTTCGAATCCCCTCCCCCGCACtc
Downstream region at tRNA end position 
ttgaatatgg
Secondary structure (Cloverleaf model)
>W1910796886	Leu	CAA
                   g      ACtc ttgaatatgg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
    T C G A        T      | | | | |     G
  A         G C C G       A G G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCCCGTAGGGGTCC
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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