The detailed information of tRNA gene sequence


Sequence ID>W1910891385
Genome IDNEWJ01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum sp. SD683 [NEWJ]
Start position on genome 35530
End posion on genome 35600
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgcggtgc
tRNA gene sequence 
TGCGGGATAGGGTAATGGCAGTCCACGGGGCTCATATCCCCGAGGTCCGGGTTCGACTCC
TGGTCCCGCAAtgg
Downstream region at tRNA end position 
aggacaacga
Secondary structure (Cloverleaf model)
>W1910891385	Met	CAT
                   c      Atgg aggacaacga
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     G G T C C     A
        A A        A      | | + | |     G
      T     T G G G       C C G G G     C
      G     + + | |                 T T
      G     G T C C
        C A        A     AGGT
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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