The detailed information of tRNA gene sequence


Sequence ID>W1910912524
Genome IDNHPJ01000114
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum halodurans Cb34 [NHPJ]
Start position on genome 65911
End posion on genome 65822
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggctcactgT
tRNA gene sequence 
GCCGTGACTGGGTATTGGGGAACCCAGCGGCCTGCTATGCCGTGGCCGTCTGCTATCGGT
CTCCCGGTTCGAATCCGGGTCGCGGCGTCa
Downstream region at tRNA end position 
tgacaacgaa
Secondary structure (Cloverleaf model)
>W1910912524	Ser	GCT
                   T      GTCa tgacaacgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     G - C
                     A - T          T A
                    C     G G G C C     A
      T T A        T      | | | | |     G
    G       T G G G       C C C G G     C
    G       | | | |                 T T
    G       A C C C
      G A          A     GGCCGTCTGCTATCGGTCT
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       T
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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