The detailed information of tRNA gene sequence


Sequence ID>C09110597
Genome IDCP001339
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio sulfidiphilus HL-EbGr7 HL-EbGR7 [CP001339]
Start position on genome 1387757
End posion on genome 1387847
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatcaactcc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTCAAAAGCCC
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattcaaaac
Secondary structure (Cloverleaf model)
>C09110597	Ser	GCT
                   c      GCCA tattcaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGGGTCAAAAGCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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