The detailed information of tRNA gene sequence


Sequence ID>C09107063
Genome IDCP001154
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesLaribacter hongkongensis HLHK9 [CP001154]
Start position on genome 2239828
End posion on genome 2239752
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gagcgatgcc
tRNA gene sequence 
GGGTGGTTAGTCTCAGTTGGTAGAGCGCTGCCTTCACACGGCAGAGGTCACTGGTTCGAG
TCCAGTACCACCCACCA
Downstream region at tRNA end position 
cgcagcggag
Secondary structure (Cloverleaf model)
>C09107063	Val	CAC
                   c      ACCA cgcagcggag
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
      G A C        A      | | | | |     G
    T       T C T G       A C T G G     C
    T       +   + |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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