The detailed information of tRNA gene sequence


Sequence ID>C09102337
Genome IDCP001357
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hyodysenteriae WA1 WA1; ATCC 49526 [CP001357]
Start position on genome 2089817
End posion on genome 2089890
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagaattag
tRNA gene sequence 
GGGCCAGTAGCTCAGTCGGTTAGAGCAGATGACTCATAATCATCGGGTCCGGGGTTCAAG
TCCCTGCTGGCCCAata
Downstream region at tRNA end position 
ccctaaatac
Secondary structure (Cloverleaf model)
>C09102337	Met	CAT
                   g      Aata ccctaaatac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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