The detailed information of tRNA gene sequence


Sequence ID>W1911245778
Genome IDNSKI01000027
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasmatales bacterium 4B 4B [NSKI]
Start position on genome 12159
End posion on genome 12255
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ttgtgtttat
tRNA gene sequence 
GGAAGCACTTATGTAACTGGTGTGCATGCAGGTCTTCAAAACCTTGTTGTGGGTGTAAAA
ATTCATAGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
tttttaattt
Secondary structure (Cloverleaf model)
>W1911245778	Sec	TCA
                   t      GCCA tttttaattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    T     T A C C C     A
      C A A        T      + | | | |     G
    T       T G T A       G T G G G     C
    G       + | | |                 T T
    G       G C A T
      T G T        G     GTTGTGGGTGTAAAAATTCATAG
                    C   T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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