The detailed information of tRNA gene sequence


Sequence ID>CHL090100813
Genome IDAP005672
Search identical group
Phylum/ClassViridiplantae
SpeciesPhyscomitrella patens subsp. patens
Start position on genome 41848
End posion on genome 41938
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaaaaatA
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCATAGTTTTTCAAAAC
TATCGAGGGTTCGAATCCCTCTCTCTCCTTtt
Downstream region at tRNA end position 
ttctttttaa
Secondary structure (Cloverleaf model)
>CHL090100813	Ser	TGA
                   A      TTtt ttctttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    T       T G G C
      T T A        T     CATAGTTTTTCAAAACTATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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