The detailed information of tRNA gene sequence


Sequence ID>CHL090100828
Genome IDAP005672
Search identical group
Phylum/ClassViridiplantae
SpeciesPhyscomitrella patens subsp. patens
Start position on genome 33399
End posion on genome 33311
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgatactctA
tRNA gene sequence 
GGAAAGATGGCCGAGTGGTCGAAGGCGTAGCATTGGAAATGCTATGTAGACTTACGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCTTtt
Downstream region at tRNA end position 
ttaacaaaaa
Secondary structure (Cloverleaf model)
>CHL090100828	Ser	GGA
                   A      TTtt ttaacaaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTAGACTTACGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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