The detailed information of tRNA gene sequence


Sequence ID>CHL090100830
Genome IDAP005672
Search identical group
Phylum/ClassViridiplantae
SpeciesPhyscomitrella patens subsp. patens
Start position on genome 28475
End posion on genome 28402
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatattgtta
tRNA gene sequence 
GCCTACTTAACTCAGTGGTTTAGAGTATCGCTTTCATACGGCGAGAGTCATTGGTTCAAA
TCCAATAGTAGGTAatt
Downstream region at tRNA end position 
aataaataat
Secondary structure (Cloverleaf model)
>CHL090100830	Met	CAT
                   a      Aatt aataaataat
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      T G A        A      | | | | |     A
    G       C T C A       A T T G G     C
    G       | | | |                 T T
    T       G A G T
      T T A        A     GAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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