The detailed information of tRNA gene sequence


Sequence ID>CHL090101482
Genome IDAY522329
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Indica Group
Start position on genome 12848
End posion on genome 12773
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgctccaG
tRNA gene sequence 
AGCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCACGGGTTCGAT
TCCCGTCTCCGCACTta
Downstream region at tRNA end position 
gcagtctgta
Secondary structure (Cloverleaf model)
>CHL090101482	Met	CAT
                   G      CTta gcagtctgta
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C G A G       A C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    C - G
                    G + T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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