The detailed information of tRNA gene sequence


Sequence ID>CHL090101483
Genome IDAY522329
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Indica Group
Start position on genome 11529
End posion on genome 11442
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaggctgt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCTAGGAACT
ATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gctttcctct
Secondary structure (Cloverleaf model)
>CHL090101483	Ser	TGA
                   t      Tttt gctttcctct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        T     TATAGTTCTAGGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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