The detailed information of tRNA gene sequence


Sequence ID>CHL090102171
Genome IDDQ383816
Search identical group
Phylum/ClassViridiplantae
SpeciesLactuca sativa cultivar Salinas
Start position on genome 35203
End posion on genome 35121
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgtctttc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCCCCGGTCTTGAAAACCGGTATAGTTTACTATCGA
GGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
ttgcttgtta
Secondary structure (Cloverleaf model)
>CHL090102171	Ser	TGA
                   c      Tttt ttgcttgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        C     TATAGTTTACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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