The detailed information of tRNA gene sequence


Sequence ID>CHL090102434
Genome IDDQ865975
Search identical group
Phylum/ClassViridiplantae
SpeciesCucumis sativus cultivar GY14
Start position on genome 8766
End posion on genome 8679
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttccatttgg
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGTCGGATTGCTAATCCGTTGTACGATTTTTTTGT
ACCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
ctgtcaatta
Secondary structure (Cloverleaf model)
>CHL090102434	Ser	GCT
                   g      Gttt ctgtcaatta
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTACGATTTTTTTGTACC
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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