The detailed information of tRNA gene sequence


Sequence ID>CHL090102438
Genome IDDQ865976
Search identical group
Phylum/ClassViridiplantae
SpeciesCucumis sativus strain CHIPPER
Start position on genome 28936
End posion on genome 29008
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtatcgtttt
tRNA gene sequence 
GGCGACATGGCCGAGCGGTAAGGCGGGGGACTGCAAATCCCTTTTTCCCCAGTTCAAATC
CGGGTGTCGCCTCat
Downstream region at tRNA end position 
caacaaacaa
Secondary structure (Cloverleaf model)
>CHL090102438	Cys	GCA
                   t      TCat caacaaacaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        G      | | |   |     A
      C     G C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTTTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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