The detailed information of tRNA gene sequence


Sequence ID>CHL090102441
Genome IDDQ865976
Search identical group
Phylum/ClassViridiplantae
SpeciesCucumis sativus strain CHIPPER
Start position on genome 47304
End posion on genome 47390
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcattctgta
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGTAGCATTGGAACTGCTATGTAGGCTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGtac
Downstream region at tRNA end position 
taattcaaca
Secondary structure (Cloverleaf model)
>CHL090102441	Ser	GGA
                   a      Gtac taattcaaca
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTAGGCTTTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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