The detailed information of tRNA gene sequence


Sequence ID>CHL090102454
Genome IDDQ865976
Search identical group
Phylum/ClassViridiplantae
SpeciesCucumis sativus strain CHIPPER
Start position on genome 88960
End posion on genome 88886
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccccgctaa
tRNA gene sequence 
GCATCCATGGCTGAATGGTTAAAGCGCCCAACTCATAATTGGCGAATTCGTAGGTTCAAT
TCCTACTGGATGCACgc
Downstream region at tRNA end position 
caatgggacc
Secondary structure (Cloverleaf model)
>CHL090102454	Met	CAT
                   a      ACgc caatgggacc
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T          T T
                    T     C A T C C     A
      T A A        G      | | | | |     A
    G       G T C G       G T A G G     C
    G         | | |                 T T
    T       A A G C
      T A          G     GAATTC
                    C   C
                    C - G
                    C - G
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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