The detailed information of tRNA gene sequence


Sequence ID>CHL090102752
Genome IDEF067921
Search identical group
Phylum/Classstramenopiles
SpeciesThalassiosira pseudonana
Start position on genome 49735
End posion on genome 49823
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acttaatttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAAATCTTTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTAtt
Downstream region at tRNA end position 
ttaaaaaact
Secondary structure (Cloverleaf model)
>CHL090102752	Ser	GCT
                   A      TAtt ttaaaaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAAATCTTTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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