The detailed information of tRNA gene sequence


Sequence ID>CHL090102779
Genome IDEF115541
Search identical group
Phylum/ClassViridiplantae
SpeciesHordeum vulgare subsp. vulgare
Start position on genome 45157
End posion on genome 45243
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagttatgta
tRNA gene sequence 
GGAAAGATGGCCGAGCGGTTCAAGGCGTAGCATTGGAACTGCTATGTAGACTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
ttcttaattc
Secondary structure (Cloverleaf model)
>CHL090102779	Ser	GGA
                   a      Gttt ttcttaattc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T C A        G     TGTAGACTTTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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