The detailed information of tRNA gene sequence


Sequence ID>CHL090102801
Genome IDEF115541
Search identical group
Phylum/ClassViridiplantae
SpeciesHordeum vulgare subsp. vulgare
Start position on genome 8177
End posion on genome 8089
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttggaacgt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGGCGGATTGCTAATCCGTTGTACAATTTTTTTGT
ACCGAGGGTTCGAATCCCTCTCTTTCCGCtc
Downstream region at tRNA end position 
ccttggatca
Secondary structure (Cloverleaf model)
>CHL090102801	Ser	GCT
                   t      GCtc ccttggatca
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTACAATTTTTTTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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