The detailed information of tRNA gene sequence


Sequence ID>W1911516738
Genome IDOEZH01000165
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile 173070 [OEZH]
Start position on genome 36194
End posion on genome 36284
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atagagatat
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTCAAGAGTATCCCCTGCTAAGGGATTAGGCTGGGTAACCGG
TGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
attattaaag
Secondary structure (Cloverleaf model)
>W1911516738	Ser	GCT
                   t      GCCA attattaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T C A        T     TAGGCTGGGTAACCGGTGC
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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