The detailed information of tRNA gene sequence


Sequence ID>CHL090103239
Genome IDX15901
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Japonica Group
Start position on genome 44438
End posion on genome 44524
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agattatgga
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTCAAGGCGTAGCATTGGAACTGCTATGTAGACTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
ttcttaattc
Secondary structure (Cloverleaf model)
>CHL090103239	Ser	GGA
                   a      Gttt ttcttaattc
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T C A        G     TGTAGACTTTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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