The detailed information of tRNA gene sequence


Sequence ID>CHL090103260
Genome IDX15901
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Japonica Group
Start position on genome 12913
End posion on genome 12838
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgctccaG
tRNA gene sequence 
AGCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCACGGGTTCGAT
TCCCGTCTCCGCACTta
Downstream region at tRNA end position 
gcagtctgta
Secondary structure (Cloverleaf model)
>CHL090103260	Met	CAT
                   G      CTta gcagtctgta
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C G A G       A C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    C - G
                    G + T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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