The detailed information of tRNA gene sequence


Sequence ID>CHL090800064
Genome IDAP009366
Search identical group
Phylum/ClassViridiplantae
SpeciesAethionema cordifolium
Start position on genome 46539
End posion on genome 47135
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aagcaaaagg
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAAAATCCGTTGACTTTTAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCactg
Downstream region at tRNA end position 
tactccccaa
Secondary structure (Cloverleaf model)
>CHL090800064	Leu	TAA
                   g      actg tactccccaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGACTTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=512 (in A-loop)
AATTGGATTGAGCCTTAGTATGGAAACCTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTA
ACAACGGGCAATCCTGAGCCAAATCTCGGTTTACGCGAACAAACCCGAGTTTAGAAAACGAGAAAAAAGG
GATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTTCACTACCTTGTGTTGATAAAGGAAT
CCTTCGATCGAAACTTCAAATAAAAAAGGATGAAGGAGAAAAACCTATATTGCATAAAGATAGGTAACAC
AAAATGATCTCAAAAACGACGACCTGAATCTCTATTTCTTTTTTTTTCTATTTAAGAAATAGAAATGTTG
TGAATAAATTCGAAGTTGAAGACAAAATCGAATATTCATTGATCAAATGATTCACTTCATAGTCTGATAG
ATCTTTGGTGGAACTTATTAATAACACGAGAATAAAGATAGAGTCCTATTCTACATGTCAATACTGACAC
CAATGAAATTTATAGTAAGATG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK