The detailed information of tRNA gene sequence


Sequence ID>CHL090800066
Genome IDAP009367
Search identical group
Phylum/ClassViridiplantae
SpeciesAethionema grandiflorum
Start position on genome 4335
End posion on genome 1697
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
ttttttgggg
tRNA gene sequence
GGGTTGCTAACTCAACGGTAGAGTACTCGGCTTTTAACCGATCAGTTCCGGGTTCGAGTC
CCGGGCAACCCACta
Downstream region at tRNA end position
tggatcataa
Secondary structure (Cloverleaf model)
>CHL090800066	Lys	TTT
                   g      ACta tggatcataa
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      C     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     CAGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2566 (in A-loop)
GTGCGACTAGCATCTTTTACACATTTGTATGACGAAAAGGATTCGTCCAGATCTGCGGTAGAGTTTGTAA
GACCACGACTGATCCTGAATGGAATGAATGAAAAAATAGCATGTCGTATCAAGGGAGAATTAAGATAACA
TTTTTTTTTTGCTTTCCTCATCGGTACAACTTTGTGTTCGGTGTGGAACAAAAAAAGAAATTCCAATTTG
GGTCGAGTAAATAAATATAAATGGATGGATAAAAAACCCAGTTTTCCTGATTACCGGAAAAAAAAGAAAC
GAGCTTCCATTCGTAATTTGAAAAATTACCCAATCTAATTAAATGTTAAAAATAGATTAGTGCCTAGTAC
GGGTATGGGAAGGAGTTTTTTTCTTGCTTGTTATTGTCAATTTTTTCATGAGTCCTAATTATTTTTTCCA
TATTCTGTTTGGGTTAGGTTGGCCATGGATGTGTAAAAGAAGCAGTATATTGATAAAAAAATATATATTT
CCAAAATCAAAAGAGCGATTAGTTTACAAAAATAAAGGATTTCTAATCATCTTGTTTTGTTATTTTCGAA
TATAACGAACATACATAAACTTATTAAAGATAGAGAATCCGTTTAGCAGTCTACCTGTTTATGAGGTATC
TATTGCTTTCGTAGTCTAATACCTTATTTTGACTGTGTCGCACTATGTGTCATTTCAGAACTCAAGAAAA
TCAAGACTTTACCTTCACAGTTCAAATCGAATTTCAATCCAAATGGAGGAATTTAAAGGATATTTCGAGT
TCGATAGAGTTCGGCAACAAAATTTTCTATATCCACTTTTTTTTCGGGAGTCTATTTATGTACTTGCTTA
TGATCATGGTTTAAATAAATTAAATAGAAATCGCTCCATTTTCTTGGAAAATGCGGATTATGACAAAAAA
TATAGTTTACTAATTGTGAAACGCTTAATTTTGCGAATGTATGAACAGAATCATTTGATTATTCCCACTA
AGGATTTGAACCACAATCCCTTTTTTGGGCAGAGCAATCTTTTCTATTATCAAAAAATTTCTGTCTTATT
TGCAGTTATTGTGGAAATTCCATTTTCCCTAAGATTAGTATCCTCTTTCGAAGGAAAGCAACTCCAAAAA
TCTTATAATTTAAAATCAATTCATTCAATATTTCCCTTTTTAGAAGACAAATTATTACATTTTAATTATG
TGTTAGAGGTACGAATACCTTACCCTATCCATCTGGAAATCTTAGTTCAAACCCTACGTTACCGGGTAAA
AGATGCCTCTTCTTTGCATTTTTTTCGGTTCTGTCTATACGAGTATTGCAATTATAAGAATTTTGATATT
CAAAAAAAATCAATTTTGAATCCAAGATTTTTTTTTTTCTTATATAATTCTCATGTATGTGAATACGAAT
CCCTCTTTTTTTTTCTACGCAAGCGGTCTTCTCATTTACGATCGACATCTTCTGAAGTGCTTTTTGAGCG
AATTTTATTCTATGGAAAAATACAACATCTTGTAAAAGTTTTTGTTAATAATTTTCCGTCGACCCTAGGG
TTTCTCAAGGATCCTTTGATACATTATGTTAGATATCACGGAAAATGCATTCTGGCAACAAAAGATAGGC
CGCTTCTGATGAATAAATGGAAATATTACTTTGTTAATTTATGGCAATCCTATTTTTTCGTATGGTTGCA
ATCGCAAAAGGTCAATATAAATCAATTATCTAAAGATACTTTAGAGTTTCTGGGCTATCTGTCAAGTTTG
CAATTAAATCCTTTAGTGGTACGTAGTCAAATGTTAAAAAACGTGTTTCTAATAGAGACGGTTCGAATCA
AATTCGATACAAAAATTCCAATTTCTTCTATTATTGGATCGTTGGCTAAAGAAAAATTTTGTAATGTATT
AGGGCACCCCGTTAGTAAATCGAGTTGGACAGATTCATCAGATTCTGAGATTCGTGAACGATTTGTGCGT
ATATGCAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAAATTTGTATCGAATAAAATATA
TACTTCGTCTTTGTTGTGTTAAAACGTTGGCGCGTAAACACAAAAGTACTGTGCGCGCTTTTTTAAAAAG
GTTGGGCTCGGGTTTATTGGAAGAATTCCTTACTGGGGAAGGCAAAATTATTTCTTTGATCTTCCCAAGA
AGTTATTATGCTTCCAAAAGATTATATCGAAACCGAATTTGGTATTTGGATCTTCTTTATTTTAATGATT
TGGTCAATCATGAATAAGTTACTTATGAGACCTCATAAATCAAAATCAAATAGAAATTTGTTATAACTTA
TGAAGAGATAACAAAAAAGAATTTCTTTTTTGTTATTAAAAGTCATTTATTACTGTTTATATTATTAAAT
GTTCATACAGTTAAGACTAAGATGTAATTTACTGAATATTAAATTCGAAGAGTTAGTAGGAACCAAAGAA
ACTTAGTTTTCTATGTACACATAGAGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGA
TTTTGTACCTTTTTGTTTATTTTAACAAGGAAATTATCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK