The detailed information of tRNA gene sequence


Sequence ID>W1911582787
Genome IDPHQT01000003
Search identical group
Phylum/ClassCyanobacteria
SpeciesSynechococcus sp. BS55D (PHQT)
Start position on genome 43661
End posion on genome 43571
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
gcaagccgcT
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGCAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTtg
Downstream region at tRNA end position
acttaatcga
Secondary structure (Cloverleaf model)
>W1911582787	Ser	GCT
                   T      GTtg acttaatcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGCAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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