The detailed information of tRNA gene sequence


Sequence ID>CHL090800120
Genome IDAY582139
Search identical group
Phylum/ClassViridiplantae
SpeciesPanax ginseng
Start position on genome 49467
End posion on genome 50057
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaaagaaag
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTACGGACTTAAAATCCGTCGACTTTAAAATCGTG
AGGGTTCAAGTCCCTCTATCCCCaaaa
Downstream region at tRNA end position 
gcccatttga
Secondary structure (Cloverleaf model)
>CHL090800120	Leu	TAA
                   g      aaaa gcccatttga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=507 (in A-loop)
AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAACTTTCAAATTCAGAGAAACCCCGGAATTA
ATAAAAATGGGCAATCCTGAGCCAAATCCTGTTTTCCGAAAACAAACAAAGGTTCAGAAGGCGAAAAAAG
GGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTGGAATGTGTTGCATTGGTAGAGGAA
TCCTTCCATTGAAACTTCCAAAAGGATGAAGGATAAACGTATAGACATACGTATACGTACTGAAATACTC
TATCAAATGATTAATGACGACCCGAATCTCTATTTTTTATATGAAAACGGAAGAATTGTTGTGAATCGAT
TCCATATTGACGAAAGAATCGAATATTCATTGATCAAATAATTCACCCCATACATAGTCTGATAGTTCTT
TTGAAGAACTGATTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGGCAACAATG
AAATTTTTAGTAAGAGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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