The detailed information of tRNA gene sequence


Sequence ID>CHL090800128
Genome IDAY780259
Search identical group
Phylum/ClassViridiplantae
SpeciesEucalyptus globulus subsp. Globulus
Start position on genome 4545
End posion on genome 1919
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aatttttttc
tRNA gene sequence 
GGGTTGCTAACTCAACGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGTC
CCGGGCAACCCAttt
Downstream region at tRNA end position 
tatatagaat
Secondary structure (Cloverleaf model)
>CHL090800128	Lys	TTT
                   c      Attt tatatagaat
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      C     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2555 (in A-loop)
GTGCGGCTAGCATCTTTTACACATTTATATGAAGTAACGGATTCGTTCATACCTTCGGTAGAGTTTGTAA
GACCACGACTGATCCTGAAAGGAATGACTGGAAAAAACAGCATGTCGTATCAATAGAGAATTCTGAAAAT
ATTTCATTCTTACTGGATCCTGGATCAGTTCAAAACCTTGTTTGAATTCTTAGTGAGAAAAAAATGAAAT
GAATTCAGAGTTGGGTCGAATGAATAAATGGATAGAGTCCTATGACCTCAATTAATTATAAAGAAAGAAA
AAGTATTAAAGAAAGAAAAAGCAACGAGCTTCTGTTCATAATTTCTTAATTTGACTGATTACCCGATCTA
ATTATACGTTAAAAAGATATTAGTACCTGGTACGGGAAGGGCTTTTCCGTGAGTGGATGATTATCCATTT
CTTTTTTAATGAGTCCTAACTATTAGCTATTTCCTATTCTAGGTTATACCTAAATGTGTAGAAGAAGCGG
CATATTGATAAAGATATTTTTTTTTCCAAAATCAAAAGAGCGATTGGGTTGAAATGAAAAATAAAGGATT
TCGAATCCATCTTCTTATCCTATAACTAATATAAACGAATTCGATTGAAAAAGAGAGGATAGAGAGTCCG
TTGATGAGTCTACCTATCTCCGAGGTATCCATTTTTTTCTTACTAGAATACCTTGTTTTGACTGTATCGC
ACTATGTATCATTTGATAACCAAAAAATCCCCTACCTTTTTTGTTTCTTTTTGGAGTCAAATCGAATTTC
CAATGGAGGAATTTCAAGGATATTTCGAACTAGATAGATCTAGACAACATGACTTCCTATACCCACTTCT
TTTTCGAGAGTATATTTATGCACTTGCTCATGATCATGGTTTAAAGAAATCGATTTTGTTCGAAAATGCA
GGTTATGACAATAAATCTAGTTCAATAATTGTGAAACGTTTAATTACTCGAATGTATCAACAGAATCCTT
TGATTTTTTCAGCTAATGATTCTATCCAAAATCCATTTTTTGGGCAAAACAAGAATTTTTATTCTCAAAT
TATCTCCGAGGGATTTGCAGTCATTGTGGAAATTCCATTTTCCCTAAGATTAGTATCTTCCTTAGAAAGG
AAAGAAATAGCAAAATCTCATAAATTACGAGCAATTCATTCCATATTTCCTTTTTTAGAGGACAAATTTT
CACATTTAGATTATGTGTCGGATGTACTAATACCCTATCACATCCATCTAGAAATCTTGGTTCAAACCCT
TCGCTACTGGGTGAACGATGCCTCTTCTTTGCATTTATTACGTTTCTTTCTCCACGAGTATTGGAATAGT
CTTATTACTCAAAAGAACCATATTACCATTTTTTCAAAAGGTAATCCAAGATTATTCTTGTTCCTATATA
ATTCTCATATATGTGAATACGAATACTTCTTTCTTTTTCTCCGTAATCAATCTTCTCATTTACGGTCAAC
ATCTTCTGGAATCTTTTTTGAGCGAATATATTTCTATGTAAAAATAGAACATTTTGTCAAAGTCTTCTAT
GATAATGATTTTCAGTGCATCCTATGGTTCTTCAAAGATCCTTTCATGCATTATGTTCGATATCAAGGAA
AATCAATTCTGGCTTCAAAAGATACGCCTCTTCTGATGAAGAAATGGAAATATTACCTTGTTAATTTATG
GCAATATCATTTTTACGCCTGGTTTCAACCAGGAAGGATCGATATAAACCAATTATGCAAGTATTCTCTT
TACTTTTTGGGCTATCGTTCAAGCGTGCGACTAAATCCTTCAGTGGTACGAAGTCAAATGCTAGAAAATT
CATTTCTAATAAATAATGCTATGAAGAAGTTCGAGACAATAGTTCCAATTATTCCTCTGATTGGATCATT
GTCTAAAGCGAATTTTTGTGACACATTAGGGCATCCCATTAGTAAACCGACCCGGGCTGATTCATCAGAT
TCTGATATTATCGACCGTTTTTTGCGTATATCCAGAAATCTTTCTCATTATCACAGCGGATCCTCAAAAA
AAAAGAGTTTATATCGAGTAAAATATATACTTCGACTTTCTTGTGTTAAAACTTTGGCTCGTAAACACAA
AAAGACTGTACGTACTTTTTTAAAAAGATTAGGTTCGGAATTTTTGGAAGAATTCCTTACGGAGGAAGAA
GTTGTTCTTTCTTTGATCTTCCCAAGAACTTATTCTACTTCACGAAGGTTATATAGAGGGCGGATTTGGT
ATTTGGATATTACTTCTATCAATGATCTAGTCAATTATGAATGATTGTCTATGAGATCATGGAAATGTAA
ATTATCCCTAAATAATGAAGAGATAACAAAAAAAATTCATTCATTTTTTTATGCAAATATTTATGTAGTA
AGAGTTAAGTTAGGGTTGATCGACNGAGTATTCCATTTTTCTTAGAGTCCTTTCTAGGGAAGACATTGAG
TTTTCGATGTATACATAGGGAACAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGATTTTT
GTTACGTATTTTAACAAAGAAATTATCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK