The detailed information of tRNA gene sequence


Sequence ID>CHL090800191
Genome IDDQ386163
Search identical group
Phylum/ClassViridiplantae
SpeciesSolanum tuberosum cultivar Desiree
Start position on genome 48459
End posion on genome 49040
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaaagaaag
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAAAATCCGTCGACTTTAAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCaaaa
Downstream region at tRNA end position 
gactatttaa
Secondary structure (Cloverleaf model)
>CHL090800191	Leu	TAA
                   g      aaaa gactatttaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=497 (in A-loop)
AATTGGATTGAGCCTTGGTATGGAAACTTACTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTA
ACAAAAATGGGCAATCCTGAGCCAAATCCTGTTTTCTGAAAACAAACAAAGGTTCAGAAAAAAAGGATAG
GTGCAGAGACTCAATGGAAGCTATTCTAACAAATGGAGTTAAATGCGTTGGTAGAGGACTCTTTACATCG
AAACTTCAGAAAGAAAAAGAATGAAGTGAAGGATAAACGTATATACATACGTATTGAATACTATATCAAA
TGATTAATGACGACCCGAATCCGTAGTTTTTCTATAAAAAATCGAAGAATTGGTGTGAATCCATTCTACA
TTGAAGAAAGAATCGAATATTCATTGATCAAATCATTCACTCCATAGTCTGATAGATCTTTTGAAGAACT
GATTAATCGGACGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACCGGCAACAATGAAATTTATAG
TAAAAGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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