The detailed information of tRNA gene sequence


Sequence ID>CHL090800207
Genome IDDQ673255
Search identical group
Phylum/ClassViridiplantae
SpeciesJasminum nudiflorum
Start position on genome 4667
End posion on genome 1917
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gattttcttc
tRNA gene sequence 
GGGTTGCTAACTCAACGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAATC
CCGGGCAACCCACtg
Downstream region at tRNA end position 
tcctatcgaa
Secondary structure (Cloverleaf model)
>CHL090800207	Lys	TTT
                   c      ACtg tcctatcgaa
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T A
                    T     G G C C C     A
        A A        A      | | | | |     G
      C     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2678 (in A-loop)
GTGCGGCTAGAATCTTTTACACATTTGGATGAAGCGAGGAATTCGTCCATACCATCGGTAAAGTTTGAAA
GACCGCGACTGATCCTGAAAGGGAATGAATGGAAAAAATAGCATGTCGTATCAACGGATAGTTCTGAGTC
AATTCCATTTTGATCGGATTGGTACAAAACCCTGTTCGAATTCTTGGAACGGAACAAAAGAAAGTTGGGT
CGAATGAATAAATGGATAGGGCTCTATGGCTTCAATTAATTATGGGAAAGAAAAAGCAACCAGCTTCTGT
TCTTCATTTGAATAATTTTCCGATCTAATTAGACGTTAAAAATAGATTAGTGCCTGATACGGCAAAGACT
TCTTCCCCACGAGTGGATTCTATTTTTTTTTCATTTTTAATGAATCCTAACTATTGGCATTCTCCATTAT
GGAAGGGAGATGTGTGTGTAAAAGAAGGAGCATATTGATAAAGATTTTTCCGAAATCAAAAGAGCGATTA
GGTTTCAAAAATAAAAGATTTCTAACCATCTTGTTATCCTATAACATAGACGAATTAAATGAAATGGAAA
AAGATAGGGTAGAGAATCTGTTGATAAGTTTACCTGTCTCCGAGGTATCTATTCTACCTTGTTTTGACTC
TATCGCACTATGTATCATTTGAGAACCCCAAAATCTTCTAACTTTGGTTCAAATCCAATTTCAAATGCAG
GAAATCAAAAGATATTTACAGCTAGATAGACCTCAACAACACGACTTTTTATATCCACTTATCTTTCAGG
AGTATATTTATGCACTTGCTCATGATCGGGGTTTCAATAGATCCAGTTTGTTGGAAAATCCGGGTTATGA
CAATAAATCCAGTTTACTAATTGTAAAACGGTTAATTACTCGAATGTATCAACAGAATCATTTTTGGATT
TCTTCTAATGATTCGAACCAAAATCCATTTTTTGGGCGCAACAAGAATTTGTATCCTCAAATTCTATCCG
AGGGGTTTGCATTCATTCTGGAACTTCCATTTTCTCTACGATTAATACTTTCTCTAGAAAGGAAAAAAAA
AAAGATAGTAAAATCTCAGAATTTACGATCAATTCATTCAATATTTCCTTTTTTAGAGGATAACTTTTCA
CATTTCCCTTTTGTCTTAGATATACTCATACCCCACCCCATCCATCTGGAAATCTTGGTTCAAACTCTTC
GCTGTTGGGTAAAAGATGCCTCTTCTTTGCATTTATTACGATTCTTTCTTCACGAGTATTGGAATTGGAA
TAGTCTTAGTACTCCAAAGAAAGCCAGTTCTTCTTTTTCAAAAAGGAATCAAAGATTATTCTTCTTCTTA
TATAATTCTCATGTATGTGAATACGAATCTATTTTCGTCTTTCTACGTAACCAATCTTCTCATTTACGAT
CAACATCTTCTGGGGCTCTTCTTGAACGAATCTATTTCTATGGAAAAATAGAACGTCTTGTGAACGTCTT
TCTTAAGGATTTTCAGATCAACCTATGCTTGCTCAAGGATCCTTTTATGCATTATGTTAGATATCAAGAA
AAATCAATTCTGGCGTCAAAAGGGACGCCTCTTTTCATGACTAAATGGAAATATTACCTTGTACCTTTTT
GGCAATGTTATTTTTCGCTGTGGTTTCATCCAAGAAGGATTTATCTAAACCAATTATCTAAGAATTTCCT
TGAATTTGGGGGCTATCTTTCAAGTGTGCGACTAAATGCTTCAGTGATACGGAGTCAAATTCTAGAAAAT
TCATTTCTAATCAATAATGCTATTAATAAGTTCGATACTTTTGTTCCAATTATTCCTCTGATTGGATCAT
TGGCTAAAGCACAATTTTGTAACGTATTAGGGTATCCCATTAGTAAGCTGGTTCGGACTGATTTATCAGA
TTCTGATATTATTGATCGATTTGGGCGTATATGCAGAAATCTTTCTCATTATCATAGCGGATCTTCCAAA
AGAAAGAGTTTGTATCGAATAAAGTATATACTTCGACTTTCTTGTGCTAGAACCTTGGCTCGGAAACACA
AAAGTACTGTACGTGCTTTTTTGAAAAGATTAGGCTCGGAATTATTGGAAGAATTTCTTATGTCGGAAGA
ACAAGTTCTTTCTTTGACCTTCCCAAAAGCTTCTTCCACGTTGCGGGGAGTATATCGAAGTCGGATTTGG
TTTTTGGATATTATTTGTCTCCACGATCTGGTCAATCAGAAATAATTATTCTGAAAGCTTGGAAATCTTT
AACTGCAATTTTTTGAAATGCTGTACTTCATCAATTAATAAATTACGTAATATTGAGAATATTCCTTCAT
TTTATTTATCTAAAATAGAAAGAATAGAATCTTTTTCATTTTTGAAATTTAGATAATTTCTTCCTTTCCT
TTCGAAACGTCCGTTTCGAATCGAAAATCGAATTTTTCCTAAATTCGAAAGCAAAATTCATAAATCAAAA
TGAAATGGACAAAGAGAGAACAAAGGATTTCCACTATTCTGAAATGTTGATGTAGTATGGAATAAGGGTG
AAATCAACTGAGTATTCCACCTTTGAAAGTCTTTCTAAGAATAAGAAAGGAAATGATGTATACATAGGGA
AAGCCGTGTGCAATGAAAAAAGCAAGCACGGCTTGGGGAGGGGTTTTTCCTTATTTAACTAACATAACAA
GGAAATTTTCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK