The detailed information of tRNA gene sequence


Sequence ID>CHL090800209
Genome IDDQ821119
Search identical group
Phylum/ClassViridiplantae
SpeciesAngiopteris evecta
Start position on genome 11744
End posion on genome 9264
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttgttcaaaT
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGCC
CCGGGCAACCCAAtc
Downstream region at tRNA end position 
gcgttcgatc
Secondary structure (Cloverleaf model)
>CHL090800209	Lys	TTT
                   T      AAtc gcgttcgatc
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          C G
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2407 (in A-loop)
GTGCGACTACGGGATTTTACACATTCCAATGAATTGATATTTCATTAATACCGTTGGTGATATTTTCGAG
ACTACGACTAATCTCTAAAAAAAATAAAAAATTTGAGAGAGAATACAGCATGTCGTTCTAATTGTTATAG
AATCTTTTTGATATCGAGGTTGATTAATTGATAATGCATCAAGATGTACTCGACGAAGAAATAATATTGA
GATGAAACGACTCTAGTAAATAGAGTAAAAACATCTTTATAGAATGAAGATTCTGTGTAAGTCGAAAGAG
TTAATGGATAAAGCTGATGGCTTGAATCAGAGATAAAACCGGAAGAACGAGCTTCTGCTCAGAGATTCAC
TGTCTCGAGCTCTCTCTCTACTGATTAGTAGTTAGAACTGAATCAGTAACTAATAGGAGAGAGGTTTGTT
CGTCCCTAGATTCTTGGGACGATGCTACCGCAGATGGATCCTAAATACTCGACAAAATGTGTAAAATAAC
CAGTGTGCTAACTAAATAAGAGTCTTCTCTTAGAAGTTGGGAGAGCAATCAATCTCAGAATAATTAATTC
AATTCATTATGATAATGAAGTGTTGTATCTAGAATTTATTCAGATTCTATACGATAGAGATAAAAAAATC
ATGAATTTTATTAATTAGTTGAATAGATTGCACTATGTAATATCTCGGATTATTTCTATGAAAAACAGAG
ATAGAATCTTAGTCAAGATTGATAAATTACGAGAAAAAAGAGACATTCTATGTCAACAACGTTTCTTATA
TACTATTCCCTTTCAAGAGGATATTTATGCAATTGCTTATACTCGTTCTTCGAAGAAATCAAATTTGAAC
TTGCTAGAGAATTCAGTCTTATACAAAAAATATAGTGTAATAACGATAAAACGGTTGATTACTCAATTAC
GTCAACAAAATTTTCTCAAAATATTTTTTCGAGATTGTTATCGGAATCAATTGGATAATCCTAAAAATCA
TCCATATAATAAGTTATTATTAGAGGGACTAATATTGATACTAGAAGTCTTCTCTCCAATACAAATCCAA
TTAGGAAGAAATGAATGGAAAAGTCTTCAATCTATTCATTCGCTTTTCCTTTTCATGGAGAACAAATTCT
TACATTCTAACTTTATTTTAGATATAAAGATACCCCAATCTCTTCATCCAGAGATTCTTATTCGAATCTT
TCGTCGACGAATTCAAGATACTCCCTTTTTGCATTTATCGAGATCGATTCTTCATGAGTATCAGGATCCT
ATTACCTCAGATACGTCTATATCTCCTTTTTCTAGAGAACAAAATAGTTTATTGATTCTTCTCTGGAATT
ACTATGTATACGAGTTTGAGTATCTAGTAGTTTCTTCATGGAAACGATTTTCCCGGTTACAATCGATATT
TTCCCTGGATCGAATTGATCGAACTCATTTTGATCGAAAGATAAAACATGTTATAAGACCTTATTGGATA
ATTTCTTCAAAGATCTCTTCTTTCACGAAGAATCCCTGTATTCATTACGTGAGATATAAAAATCATTCCG
TTTTAGCTTTTCAAGGAACTAATTATTTGGCAAAAAAATGGAGAAACTATCTCTTAAATTTTTGGCAATA
TCATTTTCATTGTTGGGTTCAACCCCATCGAATTTTTCTCAAAAGGTTCTCTAGGAATAGTTTCTCCTTT
CTAGGCTATATTCTAGGGATTCGAACGAGAATTAACAAGGTTCAAGCCAAGATGGAAGATGAATTACCTA
TTACCTGCCTTATTACCAAAGAATTATGTCCCATCATACCATTTTTATTATTAGTTAACTCCTTAGCAAG
GGGGGGGTTTTGCACCAATTTAGGACGTCCTGTTAGCAAATTATCCTGGACTACTTTAACAGATGATGAT
ATATTGAAGAAATTTGATCAAATTTGGAGGAGCGTATATTACTATTACAGTGGATCAATCAATAACCATG
GATTATTCAGATTAAGATATATTTTTAGATTTTCCTGTGCCAAAACGTTGGCTTGTAAACATAAGAGCAC
AACACGTATAGTTTGGAAAAGATTTAGTCTAAATTCATTTCTCAGATCTTTTTTGAAAAAACCTGAGTTA
GTTAATTCGTCTGTTTCAAAATATTATTTGCATAAGAGAAGATTTTGGTACCTAGACATTATTCAGATCA
ATCCATTAACTATTTCATTACGAGAGAGATATAATTAATATTTCTCTAGCCTGAATTCTCTAAGAAAAAA
TTCATAAAGCAATTCAAGGAATTGATAACCCATCAATCTTTTTCTAAAGTACTAAAAATCATTATGAGAG
AAATACACAGAGAAAGCCGTGTGCTTTGAAAATTGCAAGCACGGTTTGGGAAGAGGTTTTTTCGTTTCTA
ATAAAACAAGAAATAATCTACTTTCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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