The detailed information of tRNA gene sequence


Sequence ID>CHL090800305
Genome IDEF380353
Search identical group
Phylum/ClassViridiplantae
SpeciesDioscorea elephantipes
Start position on genome 4022
End posion on genome 1376
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atatttatcc
tRNA gene sequence 
GGGTTGCTAACTCAACGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGTC
CCGGGCAACCCAtac
Downstream region at tRNA end position 
ggaaataaaa
Secondary structure (Cloverleaf model)
>CHL090800305	Lys	TTT
                   c      Atac ggaaataaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      C     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2575 (in A-loop)
GTGCGACTATAATCTTTTTTCACATTTGGATGAAGCAACGAATTCGTTTAGACTATTGGTAGAGTCTATA
AGACCATGACTGATCCTGAAAGGTAATGAATGGAAAAAACAGCATGTCGTAATAAAATAAGAAATTTGGA
ATTTTCCTTTTTTTTTTAGTATAATTTTGAATTTATCCTTACCGGATCGTTACAAAATATATTGTTTTGA
TTTTTGGAAGGGTGCAGAATTTATTCTCAATTTAGAGTTAGGTCTAGTGACTAAATGGATAGAGTCTTAT
GGCCCAATTCGGGTAAAATAAAAAGAAACGAGCTTATGTTCTTAAATTTGAATAATTAAATTACCCGATC
TAATTAGATGTTAAAAATTAATTAGTACCTGATGAGGGAAAGGGTTCTCCTGAGAGTGAACCATTGATTC
CTTTTTTTTTTTAATGAATCCTAACTATAATATATAATATATTAGAATTATGGGTTGGAGACAGATGTGT
AGAAGAAATAGTATACTGATAAAGAAAATTTATTCCAAAGTCAAAAGAGCAATCAGGTTGCAAAAATAAA
GGATTTTTCTACTAACGAATATAAATATAAATAAATATAAACCAATTGGATAAAAAAGGAGAGAAAAAAA
TCTGTTGATTGGATTCCTTGTCCTCAGGGTATATATTTCTTACTGTACTATATACATACATAATACATAT
CCTGTTCTGACCATATTGCACTATGTATCATTTTATAACCCAAGAAATGCCCCCTTGCTTTCTGTTTAAG
TAGAAATGAAAATAGAAGAATTACAAGGATATTTAGAAAAAGATGGATCTAGGCAAAGGCACTTCCTATT
CCTATATCCACTTCTCTTTCAGGAGTATATTTACACACTTGCTCATGATCATGGTTTAAATGGTTCGATT
TTTGTGGAAATTTTGGATTATGACAATAAATCTAGTTCAGTACTTGTGAAACATTTAATTACTCGAATGT
ATCAACAGAATTATTTGATTTATTCAGCTGATGATTCGAACCAAAATCGAATCGTTGGGCACAACAATTT
TTTTTATTCTAAAATGATATCAGAAGGTTTTGCAGTCAGTATGGAAATTCCATTTTTACTGCGATTAGGA
TCTTCCCTCGAAGAAAAAGAAATACCTAAATCACAAAATTTGCGATCTATTCATTCAATATTTCCCTTCT
TAGAGGATAAATCATCACATTTAAATTATGTGTCAGATATATTAATACCCCATCCCATCCATCTGGAAAT
CTTGGTTCAAATACTTCAATGCTGGACTCAAGATGTTTCCTCTTTGCATTTATTGCGATTCTTTCTCCAC
GAATATCATAATTCGAATAGTTTCATTACTCCGAAAAAACCTGTTTACGTGATTTCAATTTCAAAAGAAA
ATAAAAGATTTTTTCGATTCCTATATAATTCTTATGTATTTGAATGTGAATTTTTATTAGTTTTTTTTCA
TAAACAATCCTCTTATTTACGATCAAGGTCTTCTGGAGTCTTTCTTGAGCGAACACATTTCTATGAAAAA
ATGGGGAATTTTTTAGTAGTGTGTTGTAATTATTTTCAGAAGACCCAATGGTTCTTCAAGGATCCTTTTC
TGCATTATGTTCGATATCAAGGAAAAGCAATTCTGGTGTCAAAGGGAACTCATCTTTTGATGAGGAAATG
GAGATCTTACCTTGTGCATTTTTGGCAATATTATTTTCAATTTTGGTCTCATCCCCATAGGATTCATATA
AACCAATTATCAAATTATTCCTTCTGTTTTCTGGGTTATCTTTCAAATTTACTAATAAATCTTTCCGTGG
TAAGGAGTCAAATGCTAGAAAATTCATTTGTAATAGATATTCTTACTAAGAAATTTGATACCAGAGTTTC
AGTTATTGCTCTTATTCGATCATTGTCTAAAGCGAAATTTTGTACCGTATCCGGGCATCCCATTAGTAAG
TCAATATGGACAAATTTATCAGATTTGGATATTATTCATCGATTTGGTTGGATATGTAGAAATCTTTCTC
ATTATCACAGTGGATCCTCAAAAAAACAGAGTTTGTATAGAATAAAGTATATACTTCGGATTTCGTGTGC
TAGAACTTTGGCTCGTAAACATAAAAGTAAGGTACGCGCTTTTTTGCAAAGATTAGGTTCGGGATTATTA
CAAGAATTCTTTAGAGAAGAAGAAGAAATTCTTTCTTTGATCTTCCCTCAAGCTCTTTTTCGGTCACATA
CAGGACGCATTTGGTATTTGGATATTATCTGTATCAATGACCTGCGGAATCTCATGATTGATCATAAAAT
AAAACCCTATAATGAATGCAAATAAAATGGAAATGATTTATAACTGATCAAGATAAATTCATGAATTTGC
ATTCTGAAATGCTCATCTAATCTAATAGTATAGTGGTTGAATCAACCAACTAAACTATTCAAAATTCTTA
TTCTTTTCAGGATATTAAGTTATATATGTATACATAGGGAAAGTCGTGTGCAATGAAAAATGCAAGCACG
GTTTGGGGAGGGGTCTTCTTCTTCTATTCCAACAAGGAAAAATTACCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK