The detailed information of tRNA gene sequence


Sequence ID>CHL090800320
Genome IDEU196765
Search identical group
Phylum/ClassViridiplantae
SpeciesPhaseolus vulgaris
Start position on genome 72571
End posion on genome 75203
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aattgtattg
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCAAGTC
CCGGGCAACTCttct
Downstream region at tRNA end position 
aatttctaaa
Secondary structure (Cloverleaf model)
>CHL090800320	Lys	TTT
                   g      ttct aatttctaaa
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     A
      T     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2561 (in A-loop)
GAGCGACTCTATTTTTTACACATTTCTATGAAGAAATCGGTTCGTCGATACTATTGGTAGAGCTTGTAAA
ACCACGACTGATCCAGAAAGGAATGACTGGAAAAAGTAGCATGTCGTATCAATGAAGAATTTTAAAAATA
TTTCATTCTTATAGGATCCAGCTCACATTTTTGTTTGAATTTTTGGCTCCTAAAAAAAAAATTAAGTTGG
GTTTCATTAATAAAGGGATAGAACTTCGTGGTTCTAATTCTAATAGGGAAACAAAAAGCATCGAGCTTTC
ATTTATTTTTTATTTGGATCATTACCCCATCTAATTGTACGTTAAAAAGAGGTTAGTGCTTGATGTGGGA
AAAGCTTTTCTGGTGAATGGGTTATTTTTTTTATGAGTCCTAACTATATAGCTAGTTTCCATTATTGGTA
TTTTGGGATAGCGATAAATGTGTAAAAGAAAGAGTATATTGATAAATATCTTTTTTCCAAAATCAAAAGA
GCGATTAGGTAAAAAAAAAATAAAGGATTCTTAATTAGCTCGTTATCCTAGATAAAAAAATTAGGTGAAA
AATCGATTAGAGAGAGTCCGTTCATGGGTTTGACTTGTTTTCTAGGTATATATACCTAGAATTCTCTGTT
TTGACCATATCGCACTATGTATCATTTGATAATCCAATGAATCTCTGATTCTTTATTTGACCAAATAGAC
TTTTTGAATGTTTAATGGAGAAATATCAAGCATATTTAGAACTCCGTAGATCTCGATACCAGGATATCCT
ATACCCACTTTTTTTTCGGGAATCTATTTATGGACTAGCTTATGGTCATGAGTCCTTTTTTATAGAAAAT
ATAGATTATAACAATAAATTTAGTTTACTAATTGTAAAACGTTTAAGTACTCGAATGTATCAACAGACTA
ATTTCATTCTTTTTGCTAACGATTCTAACAAAAAGACTTTTGGGGGTTATAACTATAATTTTGATTCTCA
AATAATATTAGAAGGTTTTGGTGTCGTCGTGGAGATTCTATTTTCTCTACAATTATTTATCTCTTCCTTA
AGGGGATTAGAAAGCGTAAAATCTTATAAAAATTTGCAATCAATTCATTCCATTTTTCCCTTTTTCGAAG
ATAAACTGATATATTTAAATCATAAGTCAGATATACGAATACCTTATCCTATCCATCTGGAAATCTTGGT
TCAAATCCTTCGATATTGGATAAAAGATGTCTCTTTCTTTCATTTAATAAGGTTTTTTTTTTATTACTAT
TCTAATTGGAATAGTCTTTTTCCTCCAAAAAAAGGGATTTCTCCTTTTTTTTCAAAAAGGAATCTAAGAA
TTTTCTTGTTCCTATATAATTTATATGTATGGGAATATGAATCTATCTTTCTTTTTCTACGTAACAAATC
CTCTCAGTTACAGTTAAAACATTTTCGCGTTTTTTTTGAGCGAATTTTTTTCTATGAAAAAAGAAAACAT
CTTGTAGAAATATCTACAAAGAATTGTTCATATACCTTATTCTTCTTTAAGGATACTTTCATTCATTATG
TTAGATATCAAGGAAAATCAATTCTGGTTTTAAAGAATACTCCTCTTTTGATAAATAAATGGAAATACTA
TTTTCTATATTTATGGCAATGTTATTTTGATATTTGGGCTGGACCAGAAACGATCTATATAAACCAATTA
TCTCAGTATTCATTTCACTTTTTAGGCTATTTTTTAAGTATTCCACAAAATCTTTCAGTAGTACGAAGTC
AAATGTTGAAAAATTCATTTCTAATCAAAATTGTTATCAAAAAACTTGATACAATAATTCCCATTATTCC
TCTAATGAGATCATTGGCTAAAACAAAATTTTGTAATGTAATGGGTCATCCTATTAGTAAACCGGTTTGG
GCCAATTTCTCTGATTTTTATATTCTTGACCGGTTTTTGCGCATATGCAGAAATTTTTCTCATTATTACA
ATGGATCCGCAAAAAAAAAGAGTTTCTATCAAATCAAATATATACTTCGGTTTTCTTGTATAAAAACTTT
GGCTCGTAAGCACAAAAGTACTGTGCGCACTTTTTTGAAAAAATTAAGTTCAGAAAAATTGTTGGAAGAA
TTTTTTACAGAAGAAGATCTTTTTTCTTTGATTTTTCCAAAAACTTCTTTGACTTTGCGGAGGTTTTATA
GAGGTCGGATTTGGTATTTGGATATTCTTTTCAGAAATGATTTCGTTAATCATTTAGAATTAAAAATAGG
TTATGATATTTTGTAAATCGGTGTAAATTGATAAAACGAAATTCTTTTTATTAAATTGAAATGAGGATAA
AAAAAATCATTTTTTTAATCTTCTATATCTATAGGATTTTGAAATGCTCATGTAGTCAGAGTAAAGATTC
GGGGTTAATGAATTGAATATTTAACTTTCTTAGAGTCTTTTGCTAGGCAAGTAATTCAGGTTTCAATGTA
TACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAACACGGCTTGGGGAGGGATTTTTTCTTGTTTTATT
CTATTGTTGAATTTGATTAAAGAATAAATTATCTACTTCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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