The detailed information of tRNA gene sequence


Sequence ID>CHL090800321
Genome IDU30821
Search identical group
Phylum/ClassGlaucocystophyceae
SpeciesCyanophora paradoxa
Start position on genome 12941
End posion on genome 12625
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position
taaattatta
tRNA gene sequence
GGGGATGTGGTGGAATTGGTAGACGCAACGGACTTAAAATCCGTCGATTGTATAGATCGT
GAGGGTTCAAGTCCCTCCGTCCCCAttt
Downstream region at tRNA end position
taatttttct
Secondary structure (Cloverleaf model)
>CHL090800321	Leu	TAA
                   a      Attt taatttttct
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G A G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGATTGTATAGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=232 (in A-loop)
AAAAATTTGAGCTCTTAATTAAGAAATTATTAAGTTGCAAACTCTCAAATTCAGGGAAACCTAAGTTATT
TTTTATTTGTTTTAAATAAAAAAAAATATGGCAATCCTGAGCCAAGACAAATCATTTTGTATGGTGCAGA
GACTCGATGAGAGTTATCCTAACATTTATAATGAGGATAAAGGTAGAGTCCAATTCTTTATCGAATTGAT
TAACGAAAGTTAAAAAAGAATG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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