The detailed information of tRNA gene sequence


Sequence ID>CHL090900042
Genome IDAJ271079
Search identical group
Phylum/ClassViridiplantae
SpeciesOenothera elata subsp. hookeri
Start position on genome 57504
End posion on genome 56635
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tcacattgta
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAACGATAGCCTTCCAAGCTAACGATGCGGGTTCGATTCC
CGCTACCCGCTcta
Downstream region at tRNA end position 
tctattctaa
Secondary structure (Cloverleaf model)
>CHL090900042	Gly	TCC
                   a      Tcta tctattctaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     G
      T     T T T G       G C G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     CGAT
                    A   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
intron: position=25, length=799
GTGTGATTCGTTTTCTTAATCCCTTGTATAGTTAAGGGGTCGCTCGGTTTGATTCATAGTCCGAGCAGAA
ACTTTATTTCTTAAAAGGATTTCATCTTTTATCCCGCAAGGAAGGGTTCGGGTAAAAATATACATTCTCG
TGATTTGTATCCAAAGGTCAAGTAGAAATTGGAAATTTGGATTATTAAATTGCGAAACATAATTTTTGTT
TGAATTGGATCAAGACTTCCAATTTAATAAGTATGAGTAAAAGATCCATGGATAAAGATAGAAAGGTGGA
TTTCTAATCGTAACTAAATCTTCCATTTTTTGTTTATAAAATAATATTTTATATTGTTATCCATTTTTTT
AGCTATGAAAATATTATATTTATATAGGAAAGGTTGAAGCAAACTAGCTATTAAAGGATGCCTTTAGTTT
ACTAGAGACATCGAGATCTCTTTTTTTTTTTTTTAGCTCGGTGGAAACAAAATACTTTTCCTAATCCTAA
GGATTATTTCAAATAGAAATAGAGAACGAAGTAACTAGGAATATTGTTAGAATTAGAATATCCTATTCCT
TTTCCTTATTCTAGAGGGATTGTCTAGAAAGCGAATTCTTTTGAATGGATTCAAAGAGAAAAGCTGACAT
AGATATTATGGGTGGAATTTTTTTATTTCATTGACTTATTAGATAGATTTATTTCTATCTATAGTTGGAA
ATTGATCCATCTTGCATAAAGGAGCCGAATGAAACCAAAGTTTCATGTTCGGTTTTGAATTAGAGATGTT
CAAAATGATGAATCAACATCGACTATAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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