The detailed information of tRNA gene sequence


Sequence ID>CHL090900052
Genome IDAJ316582
Search identical group
Phylum/ClassViridiplantae
SpeciesAtropa belladonna
Start position on genome 138695
End posion on genome 137908
Amino Acid Tyr
Anticodon ATA
Upstream region at tRNA start position 
tcgcacgacg
tRNA gene sequence 
GGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATGGCGAGGTCTCTGGTTCAAGTCC
AGGATGGCCCAGc
Downstream region at tRNA end position 
tgcgccaggg
Secondary structure (Cloverleaf model)
>CHL090900052	Tyr	ATA
                   g      CAGc tgcgccaggg
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A
                     T + G          G A
                    A     G A C C T     A
        T G        G      | |     +     C
      G     A C T C       C T C T G     T
      G       |   |                 G T
      T     A G C G
        A G        C     GGT
                    G   A
                    C - G
                    C   C
                    C - G
                    C - G
                  T       T *
                  G       A
                    A T A
intron: position=39, length=716 (in A-loop)
TGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCGGCGCCTGA
CCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTCCTCCTGTTCGAACCGGGGTTTGAAAC
CAAACTCCTCCTCAGGAGGATAGATGGGGCGATTCGGGTGAGATCCAATGTAGATCCAACTTTCGATTCA
CTCGTGGGATCCGGGCGGTCCGGGGGGGACCACTACGGCTCCTCTCTTCTCGAGAATCCATACATCCCTT
ATCAGTGTATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAATGGAGC
ACCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCACCCCTTTCATTCTGGGGTGACGGAGGGAT
CGTACCATTCGAGCCGTTTTTTTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCT
AGGGTTGGGCCAGGAGGGTCTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTG
CCAGGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCG
TTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGC
GATGATTTACTTCACG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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