The detailed information of tRNA gene sequence


Sequence ID>CHL090900106
Genome IDAP000423
Search identical group
Phylum/ClassViridiplantae
SpeciesArabidopsis thaliana
Start position on genome 8646
End posion on genome 9431
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttgcattgta
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAACCCTTAGCCTTCCAAGCTAACGATGCGGGTTCGATTC
CCGCTACCCGCctaa
Downstream region at tRNA end position 
attcacaatt
Secondary structure (Cloverleaf model)
>CHL090900106	Gly	TCC
                   a      ctaa attcacaatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       T T T G       G C G G G     C
    G       | |   |                 T T
    T       A A C C
      A A          C     CGAT
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
intron: position=24, length=714
GTGTGATTCGTTCCTTTAATCCCTTTAATAGTTAAAGGGTCTCTCGGTTTGATTAATCTTCCGATCAAAA
ATTTTATTTCTTAAAAGGATTTAGTCCTTTCCCTTTCAATGAAAGATTCAAGGAAGATTATAGATTCTCG
TAATTTATATCCAAAGACTCTAATCAATTGTAAATTTGGATTATGAAATTCCGAAACATAATTTTTGAAT
TGGATGACTATTTACAATTCAATAAGTATAACAAGAGGATCCATGGATAAAGCTAGAAAAGTGTCTTTCT
AATCGTAACTAAATCTTCAGTTCTATTCATTGTTTGGTATAGAAAAATTGAAGCAAAATAGCTATTAAAC
GAGAACTTTGGTTTACTAAAGACATCGACATATTATATTGTTTTAGCTCGGTAGAAACCAAATACTTTTC
CTAAGGATTCCGTTAAATAGAAATAAAGAACGAAGTAACTAGAAAGATTGTTCGAGTTGGCCCGATCTAT
CTTCTAGAAGGATCATCTAGAAAGCAAAATTTTCTGTGAAAGTACCCAGACGGAAAAAAGCTCACATAGA
TGTTATGGGTCGAATTTTTATTTCGTTCCCGTCTTTTTTTATTTGGGAATTTCTCCATCCATCATAAAGG
AGCCGAATGAAACCAAAGTTTCATGTTCGGTTTTGAATTAGAGACGTTAAAAATATAAAAATGATCAATC
GACGTCGACTAAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK