The detailed information of tRNA gene sequence


Sequence ID>CHL090900245
Genome IDAY178864
Search identical group
Phylum/ClassViridiplantae
SpeciesAdiantum capillus-veneris
Start position on genome 91123
End posion on genome 90056
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgcataat
tRNA gene sequence 
GGGCTATTAGCTCAGCGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAACC
CAGGATGGCCCAgtt
Downstream region at tRNA end position 
tcgccaaagg
Secondary structure (Cloverleaf model)
>CHL090900245	Ile	GAT
                   t      Agtt tcgccaaagg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          C A
                    T     G G A C C     A
        G A        A      + | | | |     A
      C     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=996 (in A-loop)
ATTGCGCCGTTGCGCCTGGACTGTGAACTTTTTTTCACACACGAATAGTCTGATGTGATCATCGTCGCCT
GACCCGAAGATTTGTATCATCCAAGGGACGTTAGCATGGCGTACTCCCTCCATTTTGTCTCTTTCTCCTG
ACTGGCTCGGTTCTCGGAGTCTACAAGAAGAGGTAGATGAGGCGACTCAGGTGAGATCTAATGAAGATTC
AACCTCCGAATCACTCGTGGGATTCGGGCGATCCAGGGAGGACCGGTGGTCGCTAGCAGATCCTCCTTTC
TCGGGAATCTATTCATTCCTTATCAGTGTATAGATGGCTATCTCTCGAGCACAAACGATGATAACATCGG
GCCAGACGTGAAAGACGGAGCACCTGATAACGCGTATTCACAAACCAGGAACTGCGGGATTACCCTCAGT
ATTCGGGGTAGCGGAGGGATCACACTATACGAGCCTCTCCTGCTTCTCCCGGAGGTCCGTAGAAGCAGCA
ATCGACGAAAATTACGTATGCGCGGGGGCAGGGTTCTAAATCTCCTCAATCCGAGGTTTTTTATCCGGGA
AAGAGGTAAAAAAAAAATGCCGCACCCAGACATGGAGAGACTGCCGAGGGAAGCAAGAAAGGTGGATCCA
CGGTATTTGCCCCAGCTCCCTACTTGGCTATTCCAAGTAGTCTTCAATCCCATGTACCGAGACGCCTCGG
TCCTCCCTCAACGAACAGGCTCGAAGGGAGATCCTAGAGTGTACGGGGTTAAGTTAAGCCAAGAGGATTT
CTCGACGCCTCTTTTTCCCTCCATTCCATCAAATGAAGTCTATTTCTGCGAAGGTATTATCATTGCCCTC
GGCAAAGAGATGGAACAGAGACACTTGGAGAGCGCAGTACGACGGGGAGTTGTATGCTGCGTTCGGGAAG
GATGAGTCGCCTCTAGAAAAAAAAAAGTCTATTAATTCTCCACTTCAGTGAGATACTAAATAGTGTAGGT
GCGATTATTCACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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