The detailed information of tRNA gene sequence


Sequence ID>CHL090900259
Genome IDAY780259
Search identical group
Phylum/ClassViridiplantae
SpeciesEucalyptus globulus subsp. Globulus
Start position on genome 9812
End posion on genome 10627
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgcattgta
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAACCTAGCCTTCCAAGCTAACGATGCGGGTTCGATTCCC
GCTACCCGCTCat
Downstream region at tRNA end position 
tctatactct
Secondary structure (Cloverleaf model)
>CHL090900259	Trp	CCA
                   a      TCat tctatactct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     G
      T     T T T G       G C G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     GAT
                    T   C
                    A   A
                    G   A
                    C   T
                    C   C
                  T       G
                  T       A
                    C C A
intron: position=25, length=744
GTGTGATTCGTTTTATTAATCCCTTTTATAGTTAAGGGATCCCTCGGTTTGATTTGATTCATATTCCGAA
GAAAAACTTTATTTCTTAAAAGGATTTAATCCTTTACCTCTCAACGAAGGATTCGAGGAAAAATATACAT
TCTCGTGATTTGTATCCAAGGGTCAATTAAAAATGGAAAATTGGATTATTTAATTGCGAAACATAATTTT
TTTTTGAATTGGATCAATACTTCCAATTTAATGAGTATTAGTAAAGGATCCATGGATAAATATAGAAAAG
CGTATTTCTAATCGTAACTAAATCTTCCATTTTTTCTTTTTCGATAGGAAAGATTGGAGCAAAATAGCTA
TAAATTAATAAAATTAAAAGATGATTTTAGTTTACTAGAAGCATTGACATATTATATTTTTTAGCTCGGT
GGAAACAAAATACTTTTCCTAAGGATTGTCTCAAATAGAAATAGAGAACGAAGTAACTAGGAATATTGTT
AGAATACCCTATTCCCTATTCTAGAGGGATTGTCTAGAAAGCGAATTTTTTTTTTGAATTGAAATGCATT
CAAACAGAAAAGCTGACATAGATGTTATGGATCGAATTTTTGGATTTCGTTCACGTCTTATCTTAGATAT
ATCGATATCTGGGAATTTATCTATCTTCCATAAAGGAGCCGAATGAAACCAAAGTTTCATGTTCGGTTTT
GAATTAGAGACGTTAAAAATGATGAATCAACGTCGACTATAACC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK