The detailed information of tRNA gene sequence


Sequence ID>CHL090900264
Genome IDAY780259
Search identical group
Phylum/ClassViridiplantae
SpeciesEucalyptus globulus subsp. Globulus
Start position on genome 140740
End posion on genome 139865
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttggctcgg
tRNA gene sequence 
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAAGGCGGATGTCAGCGGTTCGAGT
CCGCTTATCTCCAact
Downstream region at tRNA end position 
cgtgaactta
Secondary structure (Cloverleaf model)
>CHL090900264	Ala	TGC
                   g      Aact cgtgaactta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     ATGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A *
                  T       A
                    T G C
intron: position=39, length=803 (in A-loop)
TTGGGTCGTTGCGATTACGGGTTGGATGTCTAATTGTCCAGGCAGTAATGATAGTATCTTGTACCTGAAC
CGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACA
AAGATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGACAGTTGGTCAGATCTAGTATGGATCGTACATG
GACGGTAGTTGGAGCCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTT
GGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAAGAA
AATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGCA
TCCAGGGGTCGCGGACCGACCATAGAATCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTCTTAGGT
TGAGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGTCGG
GCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATCCTCCGGAACCACAAGAATCC
TTAGTTAGAATGGGATTCCAACTCAGCACCCTTTGCGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACAG
TACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAG
CCGGGGGGCCGGAGAGGCGGTGGTTTACCCTGT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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