The detailed information of tRNA gene sequence


Sequence ID>CHL090900380
Genome IDEF380353
Search identical group
Phylum/ClassViridiplantae
SpeciesDioscorea elephantipes
Start position on genome 134235
End posion on genome 133216
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccacacgac
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGGGGCGAGGTCTCTGGTTC
AAGTCCAGGATGGCCCAgct
Downstream region at tRNA end position 
gcgccaggga
Secondary structure (Cloverleaf model)
>CHL090900380	Ile	GAT
                   c      Agct gcgccaggga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGCGAGGTC
                    C - G
                    G - C
                    C - G
                    C   T
                    C   T
                  C       A *
                  T       A
                    G A T
intron: position=39, length=943 (in A-loop)
TCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCG
GGGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTCCTCCTGTTCGAATCGGAGTTTGAAACCAAA
CTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCTAACTTTCTATTCACTCG
TGGGATCCGGGCGGTCCGGGGGGGGACCACCACGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATC
AGTGTATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATGGAGCACCTAACA
ACGCATCTTCACAGACCAAGAACTACGAGATCACCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCGT
TCGAGCCTTTTTTCATGCTTTACCGGAGGTCTGGAGAAAGCAGCAATCAATAGGATTTCTCTAATCCTCC
CTTCCCGAAAGGAAGAAAAGAACGTGAAATTCTTTTTCCTCTCCGCAGGGACCAGGAGATTGGATCTAGC
CATAAGAAGAATGCTTGGTATAAATAACTAACTTCTTGGTCTTCGACCCCCTCAGTCACTACGAGCGCCC
CCCGATCAGTGCAATGGGATGTGTCTATTTATTTATCTCTTGACTCGAAATGGGAGCAGAGCAGGTTTGA
AAAAGGATCTTAGAGTGTCTAGGGTTGGACCAGGAGGGTCTCTTAACGCCTTCTTTTTTCTTCCCATCGG
AGTTATTTCACAAAGACTTGCCATGGTAAGGGAGAAGGGGGAACAAGCACACTTGAAGAGCGCAGTACAA
CGGAGAGCTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAAGAATTCTTGATTCTCTCCCAAT
TGGTTGGATCGTAGGTGCGATGATTTACTTCAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK