The detailed information of tRNA gene sequence


Sequence ID>SRA1000003
Genome IDSRR000281.2836
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 98
End posion on genome 25
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnnnnnntcc
tRNA gene sequence 
GCCACCTTAGCTCAGTCGGTAGAGCAGCTCCCTCGTAAAGAGCAGGTCGCCAGTTCGATT
CTGGCAGGTGGCTCtc
Downstream region at tRNA end position 
tacagattcg
Secondary structure (Cloverleaf model)
>SRA1000003	Thr	CGT
                   c      TCtc tacagattcg
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T T
                    T     C G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C   A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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