The detailed information of tRNA gene sequence


Sequence ID>SRA1000009
Genome IDSRR000281.8688
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 21
End posion on genome 96
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtgccaaaat
tRNA gene sequence 
CTTGGTGTGGCAGAATTGGTTATGCATCGGATTGCAAATCCGTTCTATGCAGGTTCGAGT
CCTGTCACCAAGTCCA
Downstream region at tRNA end position 
ttaaggannn
Secondary structure (Cloverleaf model)
>SRA1000009	Cys	GCA
                   t      TCCA ttaaggannn
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       G A C G       G C A G G     C
    G         | | |                 T T
    G       A T G C
      T T          A     TCTAT
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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