The detailed information of tRNA gene sequence


Sequence ID>SRA1000011
Genome IDSRR000281.10630
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtttctgat
tRNA gene sequence 
GGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCGGCCCCCGCTACCA
Downstream region at tRNA end position 
ctttttggta
Secondary structure (Cloverleaf model)
>SRA1000011	Met	CAT
                   t      ACCA ctttttggta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + + | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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